Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.81■□□□□ 0.76
Otud1Q9CUB6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Otud1Q9CUB6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Otud1Q9CUB6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Otud1Q9CUB6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Otud1Q9CUB6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Otud1Q9CUB6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Otud1Q9CUB6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Otud1Q9CUB6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Otud1Q9CUB6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Otud1Q9CUB6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Otud1Q9CUB6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.75■□□□□ 0.75
Otud1Q9CUB6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Otud1Q9CUB6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Otud1Q9CUB6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.73■□□□□ 0.75
Otud1Q9CUB6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Otud1Q9CUB6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Otud1Q9CUB6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Otud1Q9CUB6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.72■□□□□ 0.75
Otud1Q9CUB6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Otud1Q9CUB6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Otud1Q9CUB6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Otud1Q9CUB6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Otud1Q9CUB6 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Otud1Q9CUB6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms