Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Fcf1Q9CTH6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.1■□□□□ 0.97
Fcf1Q9CTH6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Fcf1Q9CTH6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fcf1Q9CTH6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.07■□□□□ 0.96
Fcf1Q9CTH6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fcf1Q9CTH6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.05■□□□□ 0.96
Fcf1Q9CTH6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fcf1Q9CTH6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fcf1Q9CTH6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fcf1Q9CTH6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Fcf1Q9CTH6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fcf1Q9CTH6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fcf1Q9CTH6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms