Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Gm21956-201ENSMUST00000179946 522 ntBASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61bQ9CQS8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61bQ9CQS8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61bQ9CQS8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61bQ9CQS8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.15□□□□□ -0.62
Sec61bQ9CQS8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Gm27454-201ENSMUST00000185090 204 ntBASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61bQ9CQS8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Gm44487-201ENSMUST00000205145 325 ntBASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61bQ9CQS8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms