Protein–RNA interactions for Protein: Q9CQC7

Ndufb4, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb4Q9CQC7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ndufb4Q9CQC7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ndufb4Q9CQC7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ndufb4Q9CQC7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ndufb4Q9CQC7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ndufb4Q9CQC7 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ndufb4Q9CQC7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndufb4Q9CQC7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndufb4Q9CQC7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndufb4Q9CQC7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndufb4Q9CQC7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms