Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ska1Q9CPV1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ska1Q9CPV1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ska1Q9CPV1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.59■□□□□ 0.73
Ska1Q9CPV1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ska1Q9CPV1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ska1Q9CPV1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ska1Q9CPV1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ska1Q9CPV1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ska1Q9CPV1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ska1Q9CPV1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ska1Q9CPV1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ska1Q9CPV1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ska1Q9CPV1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ska1Q9CPV1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ska1Q9CPV1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.52■□□□□ 0.72
Ska1Q9CPV1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ska1Q9CPV1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska1Q9CPV1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.51■□□□□ 0.71
Ska1Q9CPV1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska1Q9CPV1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ska1Q9CPV1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.51■□□□□ 0.71
Ska1Q9CPV1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ska1Q9CPV1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms