Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.5■■□□□ 1.51
Pcdh15Q99PJ1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdh15Q99PJ1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Pcdh15Q99PJ1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdh15Q99PJ1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh15Q99PJ1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Pcdh15Q99PJ1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh15Q99PJ1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Pcdh15Q99PJ1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.46■■□□□ 1.51
Pcdh15Q99PJ1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Pcdh15Q99PJ1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdh15Q99PJ1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdh15Q99PJ1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.51
Pcdh15Q99PJ1 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.45■■□□□ 1.51
Pcdh15Q99PJ1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Pcdh15Q99PJ1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Spcs1-204ENSMUST00000226782 949 ntBASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh15Q99PJ1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh15Q99PJ1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Gm26833-201ENSMUST00000180899 440 ntBASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh15Q99PJ1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Gm42569-201ENSMUST00000200539 472 ntBASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh15Q99PJ1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh15Q99PJ1 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.41■■□□□ 1.5
Pcdh15Q99PJ1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Pcdh15Q99PJ1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh15Q99PJ1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.4■■□□□ 1.5
Pcdh15Q99PJ1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdh15Q99PJ1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdh15Q99PJ1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
Pcdh15Q99PJ1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh15Q99PJ1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh15Q99PJ1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.38■■□□□ 1.49
Pcdh15Q99PJ1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh15Q99PJ1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh15Q99PJ1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh15Q99PJ1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Pcdh15Q99PJ1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Pcdh15Q99PJ1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms