Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4rQ99PI8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtn4rQ99PI8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn4rQ99PI8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn4rQ99PI8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn4rQ99PI8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn4rQ99PI8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn4rQ99PI8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 Rps24-207ENSMUST00000224568 714 ntBASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn4rQ99PI8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn4rQ99PI8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Etf1-202ENSMUST00000180351 108 ntBASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rQ99PI8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn4rQ99PI8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Gm10399-202ENSMUST00000202768 748 ntBASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rtn4rQ99PI8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rtn4rQ99PI8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Gm40881-201ENSMUST00000223397 166 ntBASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4rQ99PI8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rQ99PI8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.36■□□□□ 0.53
Rtn4rQ99PI8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rQ99PI8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rQ99PI8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rQ99PI8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms