Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp1aQ921W0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.35■□□□□ 0.53
Chmp1aQ921W0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp1aQ921W0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp1aQ921W0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chmp1aQ921W0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp1aQ921W0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp1aQ921W0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp1aQ921W0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.33■□□□□ 0.52
Chmp1aQ921W0 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.33■□□□□ 0.52
Chmp1aQ921W0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp1aQ921W0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp1aQ921W0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp1aQ921W0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.3■□□□□ 0.52
Chmp1aQ921W0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp1aQ921W0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp1aQ921W0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp1aQ921W0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp1aQ921W0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.27■□□□□ 0.51
Chmp1aQ921W0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Chmp1aQ921W0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp1aQ921W0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp1aQ921W0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms