Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha8Q91Y12 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.31■□□□□ 0.84
Pcdha8Q91Y12 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha8Q91Y12 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha8Q91Y12 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha8Q91Y12 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha8Q91Y12 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Gm43566-201ENSMUST00000196851 808 ntBASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha8Q91Y12 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha8Q91Y12 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha8Q91Y12 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha8Q91Y12 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha8Q91Y12 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Pcdha8Q91Y12 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.27■□□□□ 0.84
Pcdha8Q91Y12 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcdha8Q91Y12 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha8Q91Y12 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Gm13238-201ENSMUST00000117655 780 ntBASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha8Q91Y12 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcdha8Q91Y12 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha8Q91Y12 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdha8Q91Y12 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.22■□□□□ 0.83
Pcdha8Q91Y12 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha8Q91Y12 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha8Q91Y12 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha8Q91Y12 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha8Q91Y12 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha8Q91Y12 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha8Q91Y12 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdha8Q91Y12 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms