Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdha9Q91Y11 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdha9Q91Y11 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Gm40881-201ENSMUST00000223397 166 ntBASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha9Q91Y11 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha9Q91Y11 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdha9Q91Y11 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdha9Q91Y11 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha9Q91Y11 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha9Q91Y11 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha9Q91Y11 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha9Q91Y11 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha9Q91Y11 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha9Q91Y11 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha9Q91Y11 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha9Q91Y11 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.22■■□□□ 1.15
Pcdha9Q91Y11 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha9Q91Y11 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha9Q91Y11 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha9Q91Y11 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms