Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhac1Q91Y10 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhac1Q91Y10 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhac1Q91Y10 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhac1Q91Y10 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhac1Q91Y10 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhac1Q91Y10 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhac1Q91Y10 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhac1Q91Y10 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhac1Q91Y10 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhac1Q91Y10 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhac1Q91Y10 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhac1Q91Y10 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhac1Q91Y10 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhac1Q91Y10 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhac1Q91Y10 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhac1Q91Y10 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhac1Q91Y10 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms