Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb8Q91XZ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb8Q91XZ2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.38■□□□□ 0.85
Pcdhb8Q91XZ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Pcdhb8Q91XZ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb8Q91XZ2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb8Q91XZ2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Pcdhb8Q91XZ2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb8Q91XZ2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Pcdhb8Q91XZ2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb8Q91XZ2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.33■□□□□ 0.85
Pcdhb8Q91XZ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb8Q91XZ2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb8Q91XZ2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Pcdhb8Q91XZ2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb8Q91XZ2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb8Q91XZ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb8Q91XZ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb8Q91XZ2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.3■□□□□ 0.84
Pcdhb8Q91XZ2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb8Q91XZ2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb8Q91XZ2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb8Q91XZ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms