Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga3Q91XY5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga3Q91XY5 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Gm5921-201ENSMUST00000075898 882 ntBASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhga3Q91XY5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga3Q91XY5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Gm45444-201ENSMUST00000211394 898 ntBASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga3Q91XY5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga3Q91XY5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga3Q91XY5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga3Q91XY5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga3Q91XY5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga3Q91XY5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga3Q91XY5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga3Q91XY5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga3Q91XY5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga3Q91XY5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga3Q91XY5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga3Q91XY5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms