Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga6Q91XY2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.69■□□□□ 0.9
Pcdhga6Q91XY2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Pcdhga6Q91XY2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga6Q91XY2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga6Q91XY2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga6Q91XY2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.67■□□□□ 0.9
Pcdhga6Q91XY2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga6Q91XY2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhga6Q91XY2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga6Q91XY2 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.66■□□□□ 0.9
Pcdhga6Q91XY2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhga6Q91XY2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga6Q91XY2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhga6Q91XY2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga6Q91XY2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga6Q91XY2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga6Q91XY2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga6Q91XY2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga6Q91XY2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga6Q91XY2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhga6Q91XY2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.6■□□□□ 0.89
Pcdhga6Q91XY2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga6Q91XY2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga6Q91XY2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga6Q91XY2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.58■□□□□ 0.88
Pcdhga6Q91XY2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms