Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tram1Q91V04 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tram1Q91V04 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tram1Q91V04 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tram1Q91V04 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Tram1Q91V04 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.92■□□□□ 0.46
Tram1Q91V04 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tram1Q91V04 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.91■□□□□ 0.46
Tram1Q91V04 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Tram1Q91V04 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.91■□□□□ 0.46
Tram1Q91V04 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.91■□□□□ 0.46
Tram1Q91V04 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tram1Q91V04 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tram1Q91V04 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tram1Q91V04 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tram1Q91V04 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tram1Q91V04 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tram1Q91V04 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tram1Q91V04 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tram1Q91V04 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Tram1Q91V04 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.89■□□□□ 0.45
Tram1Q91V04 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tram1Q91V04 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.89■□□□□ 0.45
Tram1Q91V04 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.89■□□□□ 0.45
Tram1Q91V04 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.88■□□□□ 0.45
Tram1Q91V04 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tram1Q91V04 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Tram1Q91V04 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tram1Q91V04 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.86■□□□□ 0.45
Tram1Q91V04 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tram1Q91V04 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tram1Q91V04 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Gm44428-201ENSMUST00000204474 874 ntBASIC17.85■□□□□ 0.45
Tram1Q91V04 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.85■□□□□ 0.45
Tram1Q91V04 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.85■□□□□ 0.45
Tram1Q91V04 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tram1Q91V04 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.85■□□□□ 0.45
Tram1Q91V04 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tram1Q91V04 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tram1Q91V04 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tram1Q91V04 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tram1Q91V04 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tram1Q91V04 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms