Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Pcdhb11Q91UZ8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhb11Q91UZ8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Gm15820-201ENSMUST00000201566 728 ntBASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb11Q91UZ8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb11Q91UZ8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb11Q91UZ8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb11Q91UZ8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.42■■□□□ 1.02
Pcdhb11Q91UZ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb11Q91UZ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb11Q91UZ8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.42■■□□□ 1.02
Pcdhb11Q91UZ8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb11Q91UZ8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb11Q91UZ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.41■■□□□ 1.02
Pcdhb11Q91UZ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb11Q91UZ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhb11Q91UZ8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb11Q91UZ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
Pcdhb11Q91UZ8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb11Q91UZ8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
Pcdhb11Q91UZ8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb11Q91UZ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.39■■□□□ 1.01
Pcdhb11Q91UZ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb11Q91UZ8 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.39■■□□□ 1.01
Pcdhb11Q91UZ8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb11Q91UZ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.38■■□□□ 1.01
Pcdhb11Q91UZ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb11Q91UZ8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb11Q91UZ8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhb11Q91UZ8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb11Q91UZ8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb11Q91UZ8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb11Q91UZ8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb11Q91UZ8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb11Q91UZ8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb11Q91UZ8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb11Q91UZ8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb11Q91UZ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms