Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab40bQ8VHP8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab40bQ8VHP8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab40bQ8VHP8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab40bQ8VHP8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab40bQ8VHP8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab40bQ8VHP8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab40bQ8VHP8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rab40bQ8VHP8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab40bQ8VHP8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab40bQ8VHP8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Gm6311-201ENSMUST00000073790 878 ntBASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab40bQ8VHP8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab40bQ8VHP8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms