Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Gm40881-201ENSMUST00000223397 166 ntBASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retreg1dQ8VE91 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.59■□□□□ 0.89
Retreg1dQ8VE91 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Retreg1dQ8VE91 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg1dQ8VE91 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg1dQ8VE91 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg1dQ8VE91 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retreg1dQ8VE91 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg1dQ8VE91 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retreg1dQ8VE91 Gm10399-202ENSMUST00000202768 748 ntBASIC20.57■□□□□ 0.88
Retreg1dQ8VE91 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Retreg1dQ8VE91 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.57■□□□□ 0.88
Retreg1dQ8VE91 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retreg1dQ8VE91 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retreg1dQ8VE91 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retreg1dQ8VE91 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg1dQ8VE91 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg1dQ8VE91 Notumos-201ENSMUST00000151998 2659 ntBASIC20.52■□□□□ 0.88
Retreg1dQ8VE91 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg1dQ8VE91 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg1dQ8VE91 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg1dQ8VE91 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Retreg1dQ8VE91 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg1dQ8VE91 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Gm22238-201ENSMUST00000175222 88 ntBASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg1dQ8VE91 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.49■□□□□ 0.87
Retreg1dQ8VE91 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms