Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna3Q8R4G9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna3Q8R4G9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chrna3Q8R4G9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.52■□□□□ 0.87
Chrna3Q8R4G9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chrna3Q8R4G9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna3Q8R4G9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.5■□□□□ 0.87
Chrna3Q8R4G9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna3Q8R4G9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna3Q8R4G9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Chrna3Q8R4G9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Chrna3Q8R4G9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna3Q8R4G9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.44■□□□□ 0.86
Chrna3Q8R4G9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna3Q8R4G9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms