Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdpf1Q8R3A2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdpf1Q8R3A2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Gm43137-201ENSMUST00000198052 594 ntBASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdpf1Q8R3A2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cdpf1Q8R3A2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Mir7075-201ENSMUST00000184187 82 ntBASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Gm43017-201ENSMUST00000198296 752 ntBASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdpf1Q8R3A2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdpf1Q8R3A2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdpf1Q8R3A2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdpf1Q8R3A2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdpf1Q8R3A2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdpf1Q8R3A2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdpf1Q8R3A2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdpf1Q8R3A2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdpf1Q8R3A2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdpf1Q8R3A2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Gm9870-201ENSMUST00000063874 645 ntBASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdpf1Q8R3A2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Gm5874-201ENSMUST00000096101 508 ntBASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdpf1Q8R3A2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdpf1Q8R3A2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdpf1Q8R3A2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 Gm8493-201ENSMUST00000196881 489 ntBASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdpf1Q8R3A2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms