Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cgref1Q8R1U2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cgref1Q8R1U2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cgref1Q8R1U2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cgref1Q8R1U2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cgref1Q8R1U2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cgref1Q8R1U2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cgref1Q8R1U2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.08■□□□□ 0.97
Cgref1Q8R1U2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cgref1Q8R1U2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cgref1Q8R1U2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Cgref1Q8R1U2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.08■□□□□ 0.96
Cgref1Q8R1U2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cgref1Q8R1U2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cgref1Q8R1U2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Cgref1Q8R1U2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cgref1Q8R1U2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
Cgref1Q8R1U2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cgref1Q8R1U2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cgref1Q8R1U2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.02■□□□□ 0.95
Cgref1Q8R1U2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cgref1Q8R1U2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cgref1Q8R1U2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21■□□□□ 0.95
Cgref1Q8R1U2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 Gm7432-201ENSMUST00000210343 879 ntBASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.99■□□□□ 0.95
Cgref1Q8R1U2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cgref1Q8R1U2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms