Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tm6sf2Q8R1J1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tm6sf2Q8R1J1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tm6sf2Q8R1J1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tm6sf2Q8R1J1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.64■□□□□ 0.73
Tm6sf2Q8R1J1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tm6sf2Q8R1J1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm6sf2Q8R1J1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tm6sf2Q8R1J1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.6■□□□□ 0.73
Tm6sf2Q8R1J1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tm6sf2Q8R1J1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tm6sf2Q8R1J1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tm6sf2Q8R1J1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tm6sf2Q8R1J1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Tm6sf2Q8R1J1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.58■□□□□ 0.73
Tm6sf2Q8R1J1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Tm6sf2Q8R1J1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tm6sf2Q8R1J1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tm6sf2Q8R1J1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.58■□□□□ 0.72
Tm6sf2Q8R1J1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.58■□□□□ 0.72
Tm6sf2Q8R1J1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tm6sf2Q8R1J1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tm6sf2Q8R1J1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm6sf2Q8R1J1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tm6sf2Q8R1J1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tm6sf2Q8R1J1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tm6sf2Q8R1J1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tm6sf2Q8R1J1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tm6sf2Q8R1J1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tm6sf2Q8R1J1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms