Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alms1Q8K4E0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.65■□□□□ 0.9
Alms1Q8K4E0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alms1Q8K4E0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Alms1Q8K4E0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Alms1Q8K4E0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Alms1Q8K4E0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Alms1Q8K4E0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Alms1Q8K4E0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Alms1Q8K4E0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Alms1Q8K4E0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Alms1Q8K4E0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Alms1Q8K4E0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Alms1Q8K4E0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.61■□□□□ 0.89
Alms1Q8K4E0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Alms1Q8K4E0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Alms1Q8K4E0 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.58■□□□□ 0.89
Alms1Q8K4E0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Alms1Q8K4E0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.58■□□□□ 0.89
Alms1Q8K4E0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Alms1Q8K4E0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alms1Q8K4E0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Alms1Q8K4E0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alms1Q8K4E0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alms1Q8K4E0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alms1Q8K4E0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alms1Q8K4E0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alms1Q8K4E0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.55■□□□□ 0.88
Alms1Q8K4E0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms