Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1lQ8K1X4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nckap1lQ8K1X4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1lQ8K1X4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1lQ8K1X4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nckap1lQ8K1X4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nckap1lQ8K1X4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nckap1lQ8K1X4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1lQ8K1X4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nckap1lQ8K1X4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1lQ8K1X4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1lQ8K1X4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1lQ8K1X4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.21■□□□□ 0.83
Nckap1lQ8K1X4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nckap1lQ8K1X4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1lQ8K1X4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1lQ8K1X4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1lQ8K1X4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1lQ8K1X4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.17■□□□□ 0.82
Nckap1lQ8K1X4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1lQ8K1X4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1lQ8K1X4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1lQ8K1X4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1lQ8K1X4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.16■□□□□ 0.82
Nckap1lQ8K1X4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1lQ8K1X4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nckap1lQ8K1X4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nckap1lQ8K1X4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nckap1lQ8K1X4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nckap1lQ8K1X4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nckap1lQ8K1X4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms