Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc47a1Q8K0H1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc47a1Q8K0H1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc47a1Q8K0H1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc47a1Q8K0H1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc47a1Q8K0H1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc47a1Q8K0H1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc47a1Q8K0H1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc47a1Q8K0H1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc47a1Q8K0H1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc47a1Q8K0H1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc47a1Q8K0H1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc47a1Q8K0H1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc47a1Q8K0H1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc47a1Q8K0H1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc47a1Q8K0H1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc47a1Q8K0H1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.48■□□□□ 0.87
Slc47a1Q8K0H1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc47a1Q8K0H1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slc47a1Q8K0H1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc47a1Q8K0H1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc47a1Q8K0H1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc47a1Q8K0H1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc47a1Q8K0H1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Slc47a1Q8K0H1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Gm5921-201ENSMUST00000075898 882 ntBASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Slc47a1Q8K0H1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Slc47a1Q8K0H1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Slc47a1Q8K0H1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc47a1Q8K0H1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc47a1Q8K0H1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.43■□□□□ 0.86
Slc47a1Q8K0H1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc47a1Q8K0H1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc47a1Q8K0H1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc47a1Q8K0H1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc47a1Q8K0H1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc47a1Q8K0H1 Gm5812-201ENSMUST00000061073 957 ntBASIC20.4■□□□□ 0.86
Slc47a1Q8K0H1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Slc47a1Q8K0H1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc47a1Q8K0H1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Slc47a1Q8K0H1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc47a1Q8K0H1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc47a1Q8K0H1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms