Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Hmgcll1Q8JZS7 Gm9847-201ENSMUST00000052528 599 ntBASIC21.71■■□□□ 1.07
Hmgcll1Q8JZS7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.71■■□□□ 1.07
Hmgcll1Q8JZS7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgcll1Q8JZS7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgcll1Q8JZS7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Hmgcll1Q8JZS7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcll1Q8JZS7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcll1Q8JZS7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcll1Q8JZS7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcll1Q8JZS7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Gm12922-201ENSMUST00000120626 809 ntBASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcll1Q8JZS7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcll1Q8JZS7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcll1Q8JZS7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcll1Q8JZS7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcll1Q8JZS7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcll1Q8JZS7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgcll1Q8JZS7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Hmgcll1Q8JZS7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.67■■□□□ 1.06
Hmgcll1Q8JZS7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Gm13241-201ENSMUST00000094493 780 ntBASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcll1Q8JZS7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.65■■□□□ 1.06
Hmgcll1Q8JZS7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hmgcll1Q8JZS7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hmgcll1Q8JZS7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgcll1Q8JZS7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Gm21956-201ENSMUST00000179946 522 ntBASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgcll1Q8JZS7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcll1Q8JZS7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.61■■□□□ 1.05
Hmgcll1Q8JZS7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.6■■□□□ 1.05
Hmgcll1Q8JZS7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcll1Q8JZS7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Hmgcll1Q8JZS7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcll1Q8JZS7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcll1Q8JZS7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcll1Q8JZS7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcll1Q8JZS7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgcll1Q8JZS7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Hmgcll1Q8JZS7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcll1Q8JZS7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms