Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim5Q8CI51 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim5Q8CI51 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim5Q8CI51 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.21■□□□□ 0.67
Pdlim5Q8CI51 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim5Q8CI51 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim5Q8CI51 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim5Q8CI51 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim5Q8CI51 Cap2-205ENSMUST00000225824 1634 ntBASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pdlim5Q8CI51 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim5Q8CI51 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Pdlim5Q8CI51 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.15■□□□□ 0.66
Pdlim5Q8CI51 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pdlim5Q8CI51 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Pdlim5Q8CI51 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim5Q8CI51 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.13■□□□□ 0.65
Pdlim5Q8CI51 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms