Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.92■■□□□ 1.42
Smc2Q8CG48 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.92■■□□□ 1.42
Smc2Q8CG48 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc2Q8CG48 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc2Q8CG48 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc2Q8CG48 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc2Q8CG48 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc2Q8CG48 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smc2Q8CG48 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Smc2Q8CG48 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.91■■□□□ 1.42
Smc2Q8CG48 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc2Q8CG48 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc2Q8CG48 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc2Q8CG48 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc2Q8CG48 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc2Q8CG48 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Smc2Q8CG48 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc2Q8CG48 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Smc2Q8CG48 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc2Q8CG48 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc2Q8CG48 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Smc2Q8CG48 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc2Q8CG48 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smc2Q8CG48 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Smc2Q8CG48 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc2Q8CG48 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.87■■□□□ 1.41
Smc2Q8CG48 Gm45444-201ENSMUST00000211394 898 ntBASIC23.87■■□□□ 1.41
Smc2Q8CG48 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.87■■□□□ 1.41
Smc2Q8CG48 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc2Q8CG48 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc2Q8CG48 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc2Q8CG48 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc2Q8CG48 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc2Q8CG48 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc2Q8CG48 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.84■■□□□ 1.41
Smc2Q8CG48 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.84■■□□□ 1.41
Smc2Q8CG48 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc2Q8CG48 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc2Q8CG48 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Smc2Q8CG48 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smc2Q8CG48 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Smc2Q8CG48 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smc2Q8CG48 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc2Q8CG48 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.81■■□□□ 1.4
Smc2Q8CG48 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Smc2Q8CG48 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.81■■□□□ 1.4
Smc2Q8CG48 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Smc2Q8CG48 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc2Q8CG48 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc2Q8CG48 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc2Q8CG48 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc2Q8CG48 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Gm5921-201ENSMUST00000075898 882 ntBASIC23.79■■□□□ 1.4
Smc2Q8CG48 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.79■■□□□ 1.4
Smc2Q8CG48 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Smc2Q8CG48 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.79■■□□□ 1.4
Smc2Q8CG48 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Smc2Q8CG48 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc2Q8CG48 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Smc2Q8CG48 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms