Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SynpoQ8CC35 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SynpoQ8CC35 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SynpoQ8CC35 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.09■□□□□ 0.81
SynpoQ8CC35 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SynpoQ8CC35 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SynpoQ8CC35 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Gm15039-201ENSMUST00000118914 875 ntBASIC20.08■□□□□ 0.81
SynpoQ8CC35 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SynpoQ8CC35 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SynpoQ8CC35 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SynpoQ8CC35 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SynpoQ8CC35 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
SynpoQ8CC35 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SynpoQ8CC35 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.06■□□□□ 0.8
SynpoQ8CC35 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynpoQ8CC35 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SynpoQ8CC35 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.05■□□□□ 0.8
SynpoQ8CC35 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.05■□□□□ 0.8
SynpoQ8CC35 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SynpoQ8CC35 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.04■□□□□ 0.8
SynpoQ8CC35 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SynpoQ8CC35 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.03■□□□□ 0.8
SynpoQ8CC35 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SynpoQ8CC35 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.02■□□□□ 0.8
SynpoQ8CC35 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SynpoQ8CC35 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SynpoQ8CC35 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SynpoQ8CC35 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20■□□□□ 0.79
SynpoQ8CC35 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20■□□□□ 0.79
SynpoQ8CC35 Gm7417-201ENSMUST00000192950 473 ntBASIC20■□□□□ 0.79
SynpoQ8CC35 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SynpoQ8CC35 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SynpoQ8CC35 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SynpoQ8CC35 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SynpoQ8CC35 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
SynpoQ8CC35 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SynpoQ8CC35 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms