Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shisa4Q8CA71 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shisa4Q8CA71 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shisa4Q8CA71 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Gm40881-201ENSMUST00000223397 166 ntBASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa4Q8CA71 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shisa4Q8CA71 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shisa4Q8CA71 Gm10399-202ENSMUST00000202768 748 ntBASIC24.65■■□□□ 1.54
Shisa4Q8CA71 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.65■■□□□ 1.54
Shisa4Q8CA71 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shisa4Q8CA71 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shisa4Q8CA71 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Shisa4Q8CA71 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Shisa4Q8CA71 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.64■■□□□ 1.54
Shisa4Q8CA71 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.64■■□□□ 1.53
Shisa4Q8CA71 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shisa4Q8CA71 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.63■■□□□ 1.53
Shisa4Q8CA71 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shisa4Q8CA71 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shisa4Q8CA71 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shisa4Q8CA71 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shisa4Q8CA71 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shisa4Q8CA71 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Shisa4Q8CA71 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shisa4Q8CA71 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Shisa4Q8CA71 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
Shisa4Q8CA71 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shisa4Q8CA71 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Shisa4Q8CA71 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.59■■□□□ 1.53
Shisa4Q8CA71 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shisa4Q8CA71 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shisa4Q8CA71 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Shisa4Q8CA71 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Shisa4Q8CA71 Etf1-202ENSMUST00000180351 108 ntBASIC24.58■■□□□ 1.53
Shisa4Q8CA71 Serp2-204ENSMUST00000228055 705 ntBASIC24.58■■□□□ 1.53
Shisa4Q8CA71 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.58■■□□□ 1.52
Shisa4Q8CA71 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Shisa4Q8CA71 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shisa4Q8CA71 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.57■■□□□ 1.52
Shisa4Q8CA71 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.57■■□□□ 1.52
Shisa4Q8CA71 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.57■■□□□ 1.52
Shisa4Q8CA71 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.57■■□□□ 1.52
Shisa4Q8CA71 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shisa4Q8CA71 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shisa4Q8CA71 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.55■■□□□ 1.52
Shisa4Q8CA71 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Shisa4Q8CA71 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Shisa4Q8CA71 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Shisa4Q8CA71 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shisa4Q8CA71 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.54■■□□□ 1.52
Shisa4Q8CA71 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shisa4Q8CA71 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shisa4Q8CA71 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shisa4Q8CA71 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shisa4Q8CA71 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.53■■□□□ 1.52
Shisa4Q8CA71 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Shisa4Q8CA71 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Shisa4Q8CA71 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms