Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zim1Q8C393 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zim1Q8C393 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zim1Q8C393 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zim1Q8C393 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zim1Q8C393 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zim1Q8C393 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Zim1Q8C393 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Zim1Q8C393 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Zim1Q8C393 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.48■□□□□ 0.39
Zim1Q8C393 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zim1Q8C393 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Zim1Q8C393 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zim1Q8C393 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zim1Q8C393 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Zim1Q8C393 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zim1Q8C393 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zim1Q8C393 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zim1Q8C393 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zim1Q8C393 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zim1Q8C393 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zim1Q8C393 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zim1Q8C393 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zim1Q8C393 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zim1Q8C393 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zim1Q8C393 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Zim1Q8C393 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Zim1Q8C393 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Zim1Q8C393 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.45■□□□□ 0.38
Zim1Q8C393 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Zim1Q8C393 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zim1Q8C393 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zim1Q8C393 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Zim1Q8C393 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zim1Q8C393 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Zim1Q8C393 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Zim1Q8C393 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.44■□□□□ 0.38
Zim1Q8C393 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zim1Q8C393 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zim1Q8C393 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zim1Q8C393 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.43■□□□□ 0.38
Zim1Q8C393 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Zim1Q8C393 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Zim1Q8C393 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.43■□□□□ 0.38
Zim1Q8C393 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.43■□□□□ 0.38
Zim1Q8C393 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zim1Q8C393 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Zim1Q8C393 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Zim1Q8C393 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zim1Q8C393 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Zim1Q8C393 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Zim1Q8C393 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Zim1Q8C393 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Zim1Q8C393 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zim1Q8C393 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zim1Q8C393 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zim1Q8C393 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zim1Q8C393 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zim1Q8C393 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Zim1Q8C393 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zim1Q8C393 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms