Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Usp44Q8C2S0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Usp44Q8C2S0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Gm15546-201ENSMUST00000122095 826 ntBASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp44Q8C2S0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.71■■□□□ 1.55
Usp44Q8C2S0 Gm10399-202ENSMUST00000202768 748 ntBASIC24.71■■□□□ 1.55
Usp44Q8C2S0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Usp44Q8C2S0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.71■■□□□ 1.55
Usp44Q8C2S0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Usp44Q8C2S0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Usp44Q8C2S0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Usp44Q8C2S0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp44Q8C2S0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
Usp44Q8C2S0 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.7■■□□□ 1.54
Usp44Q8C2S0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Usp44Q8C2S0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Usp44Q8C2S0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp44Q8C2S0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Usp44Q8C2S0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
Usp44Q8C2S0 Gm15820-201ENSMUST00000201566 728 ntBASIC24.68■■□□□ 1.54
Usp44Q8C2S0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Usp44Q8C2S0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Usp44Q8C2S0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Usp44Q8C2S0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Usp44Q8C2S0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Usp44Q8C2S0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Usp44Q8C2S0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Usp44Q8C2S0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Usp44Q8C2S0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Usp44Q8C2S0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Usp44Q8C2S0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.63■■□□□ 1.53
Usp44Q8C2S0 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.63■■□□□ 1.53
Usp44Q8C2S0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Usp44Q8C2S0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.62■■□□□ 1.53
Usp44Q8C2S0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Usp44Q8C2S0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Usp44Q8C2S0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.62■■□□□ 1.53
Usp44Q8C2S0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Usp44Q8C2S0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.61■■□□□ 1.53
Usp44Q8C2S0 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.61■■□□□ 1.53
Usp44Q8C2S0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Usp44Q8C2S0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Usp44Q8C2S0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Usp44Q8C2S0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.6■■□□□ 1.53
Usp44Q8C2S0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Gm40881-201ENSMUST00000223397 166 ntBASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Usp44Q8C2S0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.58■■□□□ 1.53
Usp44Q8C2S0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.58■■□□□ 1.53
Usp44Q8C2S0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.58■■□□□ 1.53
Usp44Q8C2S0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms