Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubr7Q8BU04 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubr7Q8BU04 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.28■■□□□ 1
Ubr7Q8BU04 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr7Q8BU04 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr7Q8BU04 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubr7Q8BU04 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.27■■□□□ 1
Ubr7Q8BU04 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr7Q8BU04 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubr7Q8BU04 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.26■□□□□ 0.99
Ubr7Q8BU04 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr7Q8BU04 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr7Q8BU04 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ubr7Q8BU04 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr7Q8BU04 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr7Q8BU04 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr7Q8BU04 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr7Q8BU04 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.24■□□□□ 0.99
Ubr7Q8BU04 Gm12922-201ENSMUST00000120626 809 ntBASIC21.24■□□□□ 0.99
Ubr7Q8BU04 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr7Q8BU04 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr7Q8BU04 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ubr7Q8BU04 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr7Q8BU04 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr7Q8BU04 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr7Q8BU04 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.22■□□□□ 0.99
Ubr7Q8BU04 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr7Q8BU04 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ubr7Q8BU04 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr7Q8BU04 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Gm9847-201ENSMUST00000052528 599 ntBASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr7Q8BU04 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.18■□□□□ 0.98
Ubr7Q8BU04 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr7Q8BU04 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Gm21956-201ENSMUST00000179946 522 ntBASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ubr7Q8BU04 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr7Q8BU04 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Gm13241-201ENSMUST00000094493 780 ntBASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Ubr7Q8BU04 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.14■□□□□ 0.98
Ubr7Q8BU04 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.14■□□□□ 0.98
Ubr7Q8BU04 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr7Q8BU04 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms