Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne3Q8BT60 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne3Q8BT60 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cpne3Q8BT60 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne3Q8BT60 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne3Q8BT60 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne3Q8BT60 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne3Q8BT60 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne3Q8BT60 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne3Q8BT60 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cpne3Q8BT60 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne3Q8BT60 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne3Q8BT60 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne3Q8BT60 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne3Q8BT60 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne3Q8BT60 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne3Q8BT60 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne3Q8BT60 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne3Q8BT60 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.03■□□□□ 0.8
Cpne3Q8BT60 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cpne3Q8BT60 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.02■□□□□ 0.8
Cpne3Q8BT60 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpne3Q8BT60 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cpne3Q8BT60 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.01■□□□□ 0.79
Cpne3Q8BT60 Notumos-201ENSMUST00000151998 2659 ntBASIC20■□□□□ 0.79
Cpne3Q8BT60 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20■□□□□ 0.79
Cpne3Q8BT60 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cpne3Q8BT60 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cpne3Q8BT60 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20■□□□□ 0.79
Cpne3Q8BT60 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cpne3Q8BT60 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne3Q8BT60 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne3Q8BT60 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.99■□□□□ 0.79
Cpne3Q8BT60 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms