Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip4Q8BQP8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rab11fip4Q8BQP8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
Rab11fip4Q8BQP8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rab11fip4Q8BQP8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Rab11fip4Q8BQP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rab11fip4Q8BQP8 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip4Q8BQP8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip4Q8BQP8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.06■■□□□ 1.28
Rab11fip4Q8BQP8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip4Q8BQP8 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.06■■□□□ 1.28
Rab11fip4Q8BQP8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip4Q8BQP8 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.05■■□□□ 1.28
Rab11fip4Q8BQP8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip4Q8BQP8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip4Q8BQP8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.04■■□□□ 1.28
Rab11fip4Q8BQP8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.04■■□□□ 1.28
Rab11fip4Q8BQP8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.04■■□□□ 1.28
Rab11fip4Q8BQP8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip4Q8BQP8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip4Q8BQP8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip4Q8BQP8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.03■■□□□ 1.28
Rab11fip4Q8BQP8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip4Q8BQP8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip4Q8BQP8 Gm7417-201ENSMUST00000192950 473 ntBASIC23.02■■□□□ 1.28
Rab11fip4Q8BQP8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Rab11fip4Q8BQP8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.02■■□□□ 1.28
Rab11fip4Q8BQP8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip4Q8BQP8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab11fip4Q8BQP8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab11fip4Q8BQP8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab11fip4Q8BQP8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Rab11fip4Q8BQP8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab11fip4Q8BQP8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab11fip4Q8BQP8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab11fip4Q8BQP8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rab11fip4Q8BQP8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.98■■□□□ 1.27
Rab11fip4Q8BQP8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab11fip4Q8BQP8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab11fip4Q8BQP8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab11fip4Q8BQP8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab11fip4Q8BQP8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rab11fip4Q8BQP8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms