Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smco3Q8BQM7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Terc-201ENSMUST00000082862 423 ntBASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smco3Q8BQM7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smco3Q8BQM7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.14■□□□□ 0.34
Smco3Q8BQM7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Mir3960-201ENSMUST00000198213 73 ntBASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smco3Q8BQM7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smco3Q8BQM7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smco3Q8BQM7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smco3Q8BQM7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smco3Q8BQM7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smco3Q8BQM7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smco3Q8BQM7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smco3Q8BQM7 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.09■□□□□ 0.33
Smco3Q8BQM7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smco3Q8BQM7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smco3Q8BQM7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Smco3Q8BQM7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Smco3Q8BQM7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smco3Q8BQM7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.08■□□□□ 0.32
Smco3Q8BQM7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Smco3Q8BQM7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smco3Q8BQM7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smco3Q8BQM7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms