Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sfr1Q8BP27 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Notumos-201ENSMUST00000151998 2659 ntBASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sfr1Q8BP27 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sfr1Q8BP27 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.17■□□□□ 0.98
Sfr1Q8BP27 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sfr1Q8BP27 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sfr1Q8BP27 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sfr1Q8BP27 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sfr1Q8BP27 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sfr1Q8BP27 Rps24-207ENSMUST00000224568 714 ntBASIC21.14■□□□□ 0.97
Sfr1Q8BP27 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sfr1Q8BP27 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.13■□□□□ 0.97
Sfr1Q8BP27 Gm40881-201ENSMUST00000223397 166 ntBASIC21.13■□□□□ 0.97
Sfr1Q8BP27 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sfr1Q8BP27 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sfr1Q8BP27 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Sfr1Q8BP27 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Gm9959-201ENSMUST00000068277 390 ntBASIC21.12■□□□□ 0.97
Sfr1Q8BP27 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sfr1Q8BP27 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Etf1-202ENSMUST00000180351 108 ntBASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Gm45102-201ENSMUST00000207427 857 ntBASIC21.11■□□□□ 0.97
Sfr1Q8BP27 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sfr1Q8BP27 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sfr1Q8BP27 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sfr1Q8BP27 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.09■□□□□ 0.97
Sfr1Q8BP27 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.09■□□□□ 0.97
Sfr1Q8BP27 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sfr1Q8BP27 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sfr1Q8BP27 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms