Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trim50Q810I2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim50Q810I2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim50Q810I2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.38■□□□□ 0.85
Trim50Q810I2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim50Q810I2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim50Q810I2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trim50Q810I2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim50Q810I2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim50Q810I2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim50Q810I2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.37■□□□□ 0.85
Trim50Q810I2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim50Q810I2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim50Q810I2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim50Q810I2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim50Q810I2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim50Q810I2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim50Q810I2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim50Q810I2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim50Q810I2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim50Q810I2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim50Q810I2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim50Q810I2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim50Q810I2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim50Q810I2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Trim50Q810I2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim50Q810I2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim50Q810I2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim50Q810I2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim50Q810I2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim50Q810I2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim50Q810I2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trim50Q810I2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim50Q810I2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim50Q810I2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Trim50Q810I2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim50Q810I2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Trim50Q810I2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim50Q810I2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim50Q810I2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim50Q810I2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim50Q810I2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim50Q810I2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim50Q810I2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim50Q810I2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim50Q810I2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim50Q810I2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.3■□□□□ 0.84
Trim50Q810I2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim50Q810I2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trim50Q810I2 Gm10232-201ENSMUST00000089221 720 ntBASIC20.3■□□□□ 0.84
Trim50Q810I2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim50Q810I2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim50Q810I2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim50Q810I2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim50Q810I2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim50Q810I2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim50Q810I2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim50Q810I2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim50Q810I2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim50Q810I2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim50Q810I2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim50Q810I2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms