Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Negr1Q80Z24 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.4■□□□□ 0.54
Negr1Q80Z24 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Negr1Q80Z24 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Negr1Q80Z24 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Negr1Q80Z24 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Negr1Q80Z24 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Negr1Q80Z24 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Negr1Q80Z24 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
Negr1Q80Z24 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Negr1Q80Z24 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.39■□□□□ 0.53
Negr1Q80Z24 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Negr1Q80Z24 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Negr1Q80Z24 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Negr1Q80Z24 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Negr1Q80Z24 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Negr1Q80Z24 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Negr1Q80Z24 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Negr1Q80Z24 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.36■□□□□ 0.53
Negr1Q80Z24 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Negr1Q80Z24 Gm43566-201ENSMUST00000196851 808 ntBASIC18.36■□□□□ 0.53
Negr1Q80Z24 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Negr1Q80Z24 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Negr1Q80Z24 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Negr1Q80Z24 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Negr1Q80Z24 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Negr1Q80Z24 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.35■□□□□ 0.53
Negr1Q80Z24 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Negr1Q80Z24 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Negr1Q80Z24 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Negr1Q80Z24 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Negr1Q80Z24 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Negr1Q80Z24 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Negr1Q80Z24 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Negr1Q80Z24 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.31■□□□□ 0.52
Negr1Q80Z24 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.31■□□□□ 0.52
Negr1Q80Z24 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.31■□□□□ 0.52
Negr1Q80Z24 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Negr1Q80Z24 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Negr1Q80Z24 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Negr1Q80Z24 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Negr1Q80Z24 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Negr1Q80Z24 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Negr1Q80Z24 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Negr1Q80Z24 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.29■□□□□ 0.52
Negr1Q80Z24 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Negr1Q80Z24 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Negr1Q80Z24 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Negr1Q80Z24 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms