Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh19Q80TF3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh19Q80TF3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh19Q80TF3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.52■□□□□ 0.88
Pcdh19Q80TF3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh19Q80TF3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh19Q80TF3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh19Q80TF3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.52■□□□□ 0.87
Pcdh19Q80TF3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh19Q80TF3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh19Q80TF3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh19Q80TF3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh19Q80TF3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh19Q80TF3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh19Q80TF3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh19Q80TF3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh19Q80TF3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh19Q80TF3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh19Q80TF3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh19Q80TF3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh19Q80TF3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh19Q80TF3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh19Q80TF3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdh19Q80TF3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh19Q80TF3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
Pcdh19Q80TF3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh19Q80TF3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh19Q80TF3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms