Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ush1gQ80T11 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.92■■□□□ 1.26
Ush1gQ80T11 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ush1gQ80T11 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ush1gQ80T11 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ush1gQ80T11 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ush1gQ80T11 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.9■■□□□ 1.26
Ush1gQ80T11 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ush1gQ80T11 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ush1gQ80T11 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ush1gQ80T11 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ush1gQ80T11 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ush1gQ80T11 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ush1gQ80T11 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ush1gQ80T11 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.88■■□□□ 1.25
Ush1gQ80T11 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ush1gQ80T11 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ush1gQ80T11 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ush1gQ80T11 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ush1gQ80T11 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ush1gQ80T11 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ush1gQ80T11 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ush1gQ80T11 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Ush1gQ80T11 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ush1gQ80T11 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.84■■□□□ 1.25
Ush1gQ80T11 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.84■■□□□ 1.25
Ush1gQ80T11 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ush1gQ80T11 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.83■■□□□ 1.25
Ush1gQ80T11 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.83■■□□□ 1.25
Ush1gQ80T11 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.83■■□□□ 1.25
Ush1gQ80T11 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.83■■□□□ 1.24
Ush1gQ80T11 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ush1gQ80T11 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.82■■□□□ 1.24
Ush1gQ80T11 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.82■■□□□ 1.24
Ush1gQ80T11 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ush1gQ80T11 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ush1gQ80T11 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ush1gQ80T11 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ush1gQ80T11 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.81■■□□□ 1.24
Ush1gQ80T11 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.81■■□□□ 1.24
Ush1gQ80T11 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.81■■□□□ 1.24
Ush1gQ80T11 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.81■■□□□ 1.24
Ush1gQ80T11 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.81■■□□□ 1.24
Ush1gQ80T11 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ush1gQ80T11 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Ush1gQ80T11 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Ush1gQ80T11 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ush1gQ80T11 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms