Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.52■■□□□ 1.04
Cspg5Q71M36 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cspg5Q71M36 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cspg5Q71M36 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cspg5Q71M36 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cspg5Q71M36 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cspg5Q71M36 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.5■■□□□ 1.03
Cspg5Q71M36 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cspg5Q71M36 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cspg5Q71M36 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cspg5Q71M36 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.48■■□□□ 1.03
Cspg5Q71M36 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cspg5Q71M36 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.47■■□□□ 1.03
Cspg5Q71M36 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.47■■□□□ 1.03
Cspg5Q71M36 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.47■■□□□ 1.03
Cspg5Q71M36 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cspg5Q71M36 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cspg5Q71M36 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cspg5Q71M36 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.46■■□□□ 1.03
Cspg5Q71M36 Golgb1-201ENSMUST00000023534 498 ntBASIC21.46■■□□□ 1.03
Cspg5Q71M36 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cspg5Q71M36 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cspg5Q71M36 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.45■■□□□ 1.02
Cspg5Q71M36 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.45■■□□□ 1.02
Cspg5Q71M36 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cspg5Q71M36 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cspg5Q71M36 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cspg5Q71M36 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg5Q71M36 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cspg5Q71M36 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
Cspg5Q71M36 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.42■■□□□ 1.02
Cspg5Q71M36 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cspg5Q71M36 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cspg5Q71M36 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cspg5Q71M36 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cspg5Q71M36 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.4■■□□□ 1.02
Cspg5Q71M36 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cspg5Q71M36 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cspg5Q71M36 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cspg5Q71M36 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cspg5Q71M36 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms