Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
2210407C18RikQ6YI28 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
2210407C18RikQ6YI28 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
2210407C18RikQ6YI28 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
2210407C18RikQ6YI28 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
2210407C18RikQ6YI28 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.36■□□□□ 0.53
2210407C18RikQ6YI28 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
2210407C18RikQ6YI28 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
2210407C18RikQ6YI28 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
2210407C18RikQ6YI28 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
2210407C18RikQ6YI28 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
2210407C18RikQ6YI28 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
2210407C18RikQ6YI28 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
2210407C18RikQ6YI28 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
2210407C18RikQ6YI28 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
2210407C18RikQ6YI28 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
2210407C18RikQ6YI28 Gm13238-201ENSMUST00000117655 780 ntBASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
2210407C18RikQ6YI28 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
2210407C18RikQ6YI28 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
2210407C18RikQ6YI28 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
2210407C18RikQ6YI28 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
2210407C18RikQ6YI28 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
2210407C18RikQ6YI28 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
2210407C18RikQ6YI28 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
2210407C18RikQ6YI28 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
2210407C18RikQ6YI28 Gm5812-201ENSMUST00000061073 957 ntBASIC18.31■□□□□ 0.52
2210407C18RikQ6YI28 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
2210407C18RikQ6YI28 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
2210407C18RikQ6YI28 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
2210407C18RikQ6YI28 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
2210407C18RikQ6YI28 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
2210407C18RikQ6YI28 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms