Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a1Q6PEM8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a1Q6PEM8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a1Q6PEM8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a1Q6PEM8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc46a1Q6PEM8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.33■□□□□ 0.52
Slc46a1Q6PEM8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.33■□□□□ 0.52
Slc46a1Q6PEM8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a1Q6PEM8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a1Q6PEM8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a1Q6PEM8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Slc46a1Q6PEM8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a1Q6PEM8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc46a1Q6PEM8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc46a1Q6PEM8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc46a1Q6PEM8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a1Q6PEM8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a1Q6PEM8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a1Q6PEM8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a1Q6PEM8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc46a1Q6PEM8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc46a1Q6PEM8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc46a1Q6PEM8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Slc46a1Q6PEM8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Slc46a1Q6PEM8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc46a1Q6PEM8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms