Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
Snrnp40Q6PE01 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snrnp40Q6PE01 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snrnp40Q6PE01 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Snrnp40Q6PE01 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Snrnp40Q6PE01 Gm29257-201ENSMUST00000186115 639 ntBASIC18.6■□□□□ 0.57
Snrnp40Q6PE01 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Snrnp40Q6PE01 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Snrnp40Q6PE01 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.59■□□□□ 0.57
Snrnp40Q6PE01 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Snrnp40Q6PE01 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Snrnp40Q6PE01 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Snrnp40Q6PE01 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Snrnp40Q6PE01 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Snrnp40Q6PE01 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.58■□□□□ 0.56
Snrnp40Q6PE01 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Snrnp40Q6PE01 Gm5874-201ENSMUST00000096101 508 ntBASIC18.58■□□□□ 0.56
Snrnp40Q6PE01 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Snrnp40Q6PE01 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Snrnp40Q6PE01 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.57■□□□□ 0.56
Snrnp40Q6PE01 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Snrnp40Q6PE01 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Snrnp40Q6PE01 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.56■□□□□ 0.56
Snrnp40Q6PE01 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Snrnp40Q6PE01 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp40Q6PE01 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp40Q6PE01 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp40Q6PE01 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp40Q6PE01 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp40Q6PE01 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp40Q6PE01 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp40Q6PE01 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp40Q6PE01 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp40Q6PE01 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Snrnp40Q6PE01 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Snrnp40Q6PE01 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Snrnp40Q6PE01 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Snrnp40Q6PE01 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
Snrnp40Q6PE01 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp40Q6PE01 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp40Q6PE01 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp40Q6PE01 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp40Q6PE01 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Gm43173-201ENSMUST00000202246 593 ntBASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.49■□□□□ 0.55
Snrnp40Q6PE01 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Gm7143-201ENSMUST00000222811 859 ntBASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp40Q6PE01 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Snrnp40Q6PE01 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms