Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Gm26833-201ENSMUST00000180899 440 ntBASIC23.27■■□□□ 1.32
ShbQ6PD21 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.27■■□□□ 1.32
ShbQ6PD21 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ShbQ6PD21 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ShbQ6PD21 Gm43060-201ENSMUST00000200621 289 ntBASIC23.26■■□□□ 1.31
ShbQ6PD21 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShbQ6PD21 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ShbQ6PD21 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
ShbQ6PD21 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShbQ6PD21 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShbQ6PD21 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShbQ6PD21 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.25■■□□□ 1.31
ShbQ6PD21 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.25■■□□□ 1.31
ShbQ6PD21 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.25■■□□□ 1.31
ShbQ6PD21 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.25■■□□□ 1.31
ShbQ6PD21 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.25■■□□□ 1.31
ShbQ6PD21 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.25■■□□□ 1.31
ShbQ6PD21 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.24■■□□□ 1.31
ShbQ6PD21 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ShbQ6PD21 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ShbQ6PD21 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ShbQ6PD21 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShbQ6PD21 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShbQ6PD21 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ShbQ6PD21 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ShbQ6PD21 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ShbQ6PD21 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShbQ6PD21 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ShbQ6PD21 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ShbQ6PD21 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.22■■□□□ 1.31
ShbQ6PD21 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.22■■□□□ 1.31
ShbQ6PD21 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.22■■□□□ 1.31
ShbQ6PD21 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShbQ6PD21 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShbQ6PD21 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShbQ6PD21 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ShbQ6PD21 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
ShbQ6PD21 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.21■■□□□ 1.31
ShbQ6PD21 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShbQ6PD21 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ShbQ6PD21 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ShbQ6PD21 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShbQ6PD21 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.2■■□□□ 1.3
ShbQ6PD21 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShbQ6PD21 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ShbQ6PD21 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.2■■□□□ 1.3
ShbQ6PD21 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ShbQ6PD21 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
ShbQ6PD21 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShbQ6PD21 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShbQ6PD21 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.19■■□□□ 1.3
ShbQ6PD21 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ShbQ6PD21 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ShbQ6PD21 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShbQ6PD21 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ShbQ6PD21 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShbQ6PD21 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShbQ6PD21 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.18■■□□□ 1.3
ShbQ6PD21 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.18■■□□□ 1.3
ShbQ6PD21 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShbQ6PD21 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.18■■□□□ 1.3
ShbQ6PD21 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShbQ6PD21 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.18■■□□□ 1.3
ShbQ6PD21 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Gm7143-201ENSMUST00000222811 859 ntBASIC23.17■■□□□ 1.3
ShbQ6PD21 Spcs1-204ENSMUST00000226782 949 ntBASIC23.17■■□□□ 1.3
ShbQ6PD21 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShbQ6PD21 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
ShbQ6PD21 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShbQ6PD21 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShbQ6PD21 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.16■■□□□ 1.3
ShbQ6PD21 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ShbQ6PD21 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.16■■□□□ 1.3
ShbQ6PD21 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShbQ6PD21 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
ShbQ6PD21 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.16■■□□□ 1.3
ShbQ6PD21 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShbQ6PD21 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.15■■□□□ 1.3
ShbQ6PD21 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ShbQ6PD21 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.15■■□□□ 1.3
ShbQ6PD21 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShbQ6PD21 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShbQ6PD21 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ShbQ6PD21 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ShbQ6PD21 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
ShbQ6PD21 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShbQ6PD21 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShbQ6PD21 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShbQ6PD21 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShbQ6PD21 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms