Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.23■□□□□ 0.03
Cox11Q6P8I6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.22■□□□□ 0.03
Cox11Q6P8I6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cox11Q6P8I6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.21■□□□□ 0.02
Cox11Q6P8I6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cox11Q6P8I6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.19■□□□□ 0.02
Cox11Q6P8I6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cox11Q6P8I6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cox11Q6P8I6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Gm5921-201ENSMUST00000075898 882 ntBASIC15.16■□□□□ 0.02
Cox11Q6P8I6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cox11Q6P8I6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cox11Q6P8I6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cox11Q6P8I6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms