Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga7Q6DD96 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Gm10420-201ENSMUST00000121713 882 ntBASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhga7Q6DD96 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhga7Q6DD96 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.2■□□□□ 0.83
Pcdhga7Q6DD96 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhga7Q6DD96 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhga7Q6DD96 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhga7Q6DD96 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhga7Q6DD96 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhga7Q6DD96 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga7Q6DD96 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhga7Q6DD96 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhga7Q6DD96 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcdhga7Q6DD96 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhga7Q6DD96 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhga7Q6DD96 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhga7Q6DD96 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhga7Q6DD96 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Pcdhga7Q6DD96 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhga7Q6DD96 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhga7Q6DD96 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms