Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rai1Q61818 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rai1Q61818 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rai1Q61818 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.56■□□□□ 0.88
Rai1Q61818 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Rai1Q61818 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rai1Q61818 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.55■□□□□ 0.88
Rai1Q61818 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rai1Q61818 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rai1Q61818 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rai1Q61818 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rai1Q61818 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rai1Q61818 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.54■□□□□ 0.88
Rai1Q61818 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rai1Q61818 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rai1Q61818 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rai1Q61818 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rai1Q61818 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rai1Q61818 Gm8495-201ENSMUST00000188740 694 ntBASIC20.54■□□□□ 0.88
Rai1Q61818 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.54■□□□□ 0.88
Rai1Q61818 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.54■□□□□ 0.88
Rai1Q61818 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
Rai1Q61818 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Rai1Q61818 Gm12251-201ENSMUST00000117893 792 ntBASIC20.53■□□□□ 0.88
Rai1Q61818 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.53■□□□□ 0.88
Rai1Q61818 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Rai1Q61818 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rai1Q61818 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rai1Q61818 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rai1Q61818 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rai1Q61818 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Rai1Q61818 Gm9870-201ENSMUST00000063874 645 ntBASIC20.52■□□□□ 0.87
Rai1Q61818 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.52■□□□□ 0.87
Rai1Q61818 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.51■□□□□ 0.87
Rai1Q61818 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Rai1Q61818 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rai1Q61818 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rai1Q61818 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
Rai1Q61818 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rai1Q61818 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.5■□□□□ 0.87
Rai1Q61818 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.5■□□□□ 0.87
Rai1Q61818 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.5■□□□□ 0.87
Rai1Q61818 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rai1Q61818 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.5■□□□□ 0.87
Rai1Q61818 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rai1Q61818 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rai1Q61818 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rai1Q61818 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rai1Q61818 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Rai1Q61818 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.48■□□□□ 0.87
Rai1Q61818 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rai1Q61818 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rai1Q61818 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rai1Q61818 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.47■□□□□ 0.87
Rai1Q61818 Gm43173-201ENSMUST00000202246 593 ntBASIC20.47■□□□□ 0.87
Rai1Q61818 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rai1Q61818 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rai1Q61818 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rai1Q61818 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rai1Q61818 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.46■□□□□ 0.87
Rai1Q61818 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Rai1Q61818 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rai1Q61818 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rai1Q61818 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms