Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Traf4Q61382 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.36■□□□□ 0.53
Traf4Q61382 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Traf4Q61382 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Traf4Q61382 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Traf4Q61382 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Traf4Q61382 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Traf4Q61382 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Traf4Q61382 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Traf4Q61382 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf4Q61382 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Traf4Q61382 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.34■□□□□ 0.53
Traf4Q61382 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.34■□□□□ 0.53
Traf4Q61382 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Traf4Q61382 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.34■□□□□ 0.53
Traf4Q61382 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf4Q61382 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf4Q61382 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf4Q61382 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Traf4Q61382 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Traf4Q61382 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Traf4Q61382 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Traf4Q61382 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf4Q61382 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.33■□□□□ 0.52
Traf4Q61382 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf4Q61382 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf4Q61382 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf4Q61382 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf4Q61382 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Traf4Q61382 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Traf4Q61382 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.32■□□□□ 0.52
Traf4Q61382 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf4Q61382 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Traf4Q61382 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf4Q61382 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Traf4Q61382 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.3■□□□□ 0.52
Traf4Q61382 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Traf4Q61382 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf4Q61382 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Traf4Q61382 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Traf4Q61382 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf4Q61382 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
Traf4Q61382 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Traf4Q61382 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Traf4Q61382 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.29■□□□□ 0.52
Traf4Q61382 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.29■□□□□ 0.52
Traf4Q61382 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.29■□□□□ 0.52
Traf4Q61382 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.29■□□□□ 0.52
Traf4Q61382 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Traf4Q61382 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf4Q61382 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Traf4Q61382 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Traf4Q61382 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.28■□□□□ 0.52
Traf4Q61382 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Traf4Q61382 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.28■□□□□ 0.52
Traf4Q61382 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
Traf4Q61382 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Traf4Q61382 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Traf4Q61382 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.27■□□□□ 0.52
Traf4Q61382 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Traf4Q61382 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Traf4Q61382 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.27■□□□□ 0.52
Traf4Q61382 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Traf4Q61382 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Traf4Q61382 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Traf4Q61382 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Traf4Q61382 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Traf4Q61382 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Traf4Q61382 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Traf4Q61382 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.26■□□□□ 0.51
Traf4Q61382 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.26■□□□□ 0.51
Traf4Q61382 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.26■□□□□ 0.51
Traf4Q61382 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms